A survival tree method for the analysis of discrete event times in clinical and epidemiological studies.
Identifieur interne : 001489 ( Main/Exploration ); précédent : 001488; suivant : 001490A survival tree method for the analysis of discrete event times in clinical and epidemiological studies.
Auteurs : Matthias Schmid [Allemagne] ; Helmut Küchenhoff [Allemagne] ; Achim Hoerauf [Allemagne] ; Gerhard Tutz [Allemagne]Source :
- Statistics in medicine [ 1097-0258 ] ; 2016.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- statistics & numerical data : Risk Assessment.
- Algorithms, Epidemiologic Studies, Humans, Models, Statistical, Regression Analysis, Survival Analysis.
Abstract
Survival trees are a popular alternative to parametric survival modeling when there are interactions between the predictor variables or when the aim is to stratify patients into prognostic subgroups. A limitation of classical survival tree methodology is that most algorithms for tree construction are designed for continuous outcome variables. Hence, classical methods might not be appropriate if failure time data are measured on a discrete time scale (as is often the case in longitudinal studies where data are collected, e.g., quarterly or yearly). To address this issue, we develop a method for discrete survival tree construction. The proposed technique is based on the result that the likelihood of a discrete survival model is equivalent to the likelihood of a regression model for binary outcome data. Hence, we modify tree construction methods for binary outcomes such that they result in optimized partitions for the estimation of discrete hazard functions. By applying the proposed method to data from a randomized trial in patients with filarial lymphedema, we demonstrate how discrete survival trees can be used to identify clinically relevant patient groups with similar survival behavior.
DOI: 10.1002/sim.6729
PubMed: 26358826
Affiliations:
- Allemagne
- Bavière, District de Cologne, District de Haute-Bavière, Rhénanie-du-Nord-Westphalie
- Bonn, Munich
- Université Louis-et-Maximilien de Munich
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 000C60
- to stream PubMed, to step Curation: 000C60
- to stream PubMed, to step Checkpoint: 000C60
- to stream Ncbi, to step Merge: 007862
- to stream Ncbi, to step Curation: 007862
- to stream Ncbi, to step Checkpoint: 007862
- to stream Main, to step Merge: 001491
- to stream Main, to step Curation: 001489
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">A survival tree method for the analysis of discrete event times in clinical and epidemiological studies.</title>
<author><name sortKey="Schmid, Matthias" sort="Schmid, Matthias" uniqKey="Schmid M" first="Matthias" last="Schmid">Matthias Schmid</name>
<affiliation wicri:level="3"><nlm:affiliation>Institute of Medical Biometry, Informatics and Epidemiology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Medical Biometry, Informatics and Epidemiology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127</wicri:regionArea>
<placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region>
<region type="district" nuts="2">District de Cologne</region>
<settlement type="city">Bonn</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Kuchenhoff, Helmut" sort="Kuchenhoff, Helmut" uniqKey="Kuchenhoff H" first="Helmut" last="Küchenhoff">Helmut Küchenhoff</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539</wicri:regionArea>
<placeName><region type="land" nuts="1">Bavière</region>
<region type="district" nuts="2">District de Haute-Bavière</region>
<settlement type="city">Munich</settlement>
<settlement type="city">Munich</settlement>
</placeName>
<orgName type="university">Université Louis-et-Maximilien de Munich</orgName>
</affiliation>
</author>
<author><name sortKey="Hoerauf, Achim" sort="Hoerauf, Achim" uniqKey="Hoerauf A" first="Achim" last="Hoerauf">Achim Hoerauf</name>
<affiliation wicri:level="3"><nlm:affiliation>Institute of Medical Microbiology, Immunology and Parasitology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Medical Microbiology, Immunology and Parasitology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127</wicri:regionArea>
<placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region>
<region type="district" nuts="2">District de Cologne</region>
<settlement type="city">Bonn</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Tutz, Gerhard" sort="Tutz, Gerhard" uniqKey="Tutz G" first="Gerhard" last="Tutz">Gerhard Tutz</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539</wicri:regionArea>
<placeName><region type="land" nuts="1">Bavière</region>
<region type="district" nuts="2">District de Haute-Bavière</region>
<settlement type="city">Munich</settlement>
<settlement type="city">Munich</settlement>
</placeName>
<orgName type="university">Université Louis-et-Maximilien de Munich</orgName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2016">2016</date>
<idno type="RBID">pubmed:26358826</idno>
<idno type="pmid">26358826</idno>
<idno type="doi">10.1002/sim.6729</idno>
<idno type="wicri:Area/PubMed/Corpus">000C60</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000C60</idno>
<idno type="wicri:Area/PubMed/Curation">000C60</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000C60</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000C60</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000C60</idno>
<idno type="wicri:Area/Ncbi/Merge">007862</idno>
<idno type="wicri:Area/Ncbi/Curation">007862</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">007862</idno>
<idno type="wicri:Area/Main/Merge">001491</idno>
<idno type="wicri:Area/Main/Curation">001489</idno>
<idno type="wicri:Area/Main/Exploration">001489</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">A survival tree method for the analysis of discrete event times in clinical and epidemiological studies.</title>
<author><name sortKey="Schmid, Matthias" sort="Schmid, Matthias" uniqKey="Schmid M" first="Matthias" last="Schmid">Matthias Schmid</name>
<affiliation wicri:level="3"><nlm:affiliation>Institute of Medical Biometry, Informatics and Epidemiology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Medical Biometry, Informatics and Epidemiology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127</wicri:regionArea>
<placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region>
<region type="district" nuts="2">District de Cologne</region>
<settlement type="city">Bonn</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Kuchenhoff, Helmut" sort="Kuchenhoff, Helmut" uniqKey="Kuchenhoff H" first="Helmut" last="Küchenhoff">Helmut Küchenhoff</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539</wicri:regionArea>
<placeName><region type="land" nuts="1">Bavière</region>
<region type="district" nuts="2">District de Haute-Bavière</region>
<settlement type="city">Munich</settlement>
<settlement type="city">Munich</settlement>
</placeName>
<orgName type="university">Université Louis-et-Maximilien de Munich</orgName>
</affiliation>
</author>
<author><name sortKey="Hoerauf, Achim" sort="Hoerauf, Achim" uniqKey="Hoerauf A" first="Achim" last="Hoerauf">Achim Hoerauf</name>
<affiliation wicri:level="3"><nlm:affiliation>Institute of Medical Microbiology, Immunology and Parasitology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Medical Microbiology, Immunology and Parasitology, University of Bonn, Sigmund-Freud-Str. 25, Bonn, 53127</wicri:regionArea>
<placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region>
<region type="district" nuts="2">District de Cologne</region>
<settlement type="city">Bonn</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Tutz, Gerhard" sort="Tutz, Gerhard" uniqKey="Tutz G" first="Gerhard" last="Tutz">Gerhard Tutz</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Statistics, University of Munich, Ludwigstr. 33, Munich, 80539</wicri:regionArea>
<placeName><region type="land" nuts="1">Bavière</region>
<region type="district" nuts="2">District de Haute-Bavière</region>
<settlement type="city">Munich</settlement>
<settlement type="city">Munich</settlement>
</placeName>
<orgName type="university">Université Louis-et-Maximilien de Munich</orgName>
</affiliation>
</author>
</analytic>
<series><title level="j">Statistics in medicine</title>
<idno type="eISSN">1097-0258</idno>
<imprint><date when="2016" type="published">2016</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Algorithms</term>
<term>Epidemiologic Studies</term>
<term>Humans</term>
<term>Models, Statistical</term>
<term>Regression Analysis</term>
<term>Risk Assessment (statistics & numerical data)</term>
<term>Survival Analysis</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Algorithmes</term>
<term>Analyse de régression</term>
<term>Analyse de survie</term>
<term>Humains</term>
<term>Modèles statistiques</term>
<term>Études épidémiologiques</term>
<term>Évaluation des risques ()</term>
</keywords>
<keywords scheme="MESH" qualifier="statistics & numerical data" xml:lang="en"><term>Risk Assessment</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Algorithms</term>
<term>Epidemiologic Studies</term>
<term>Humans</term>
<term>Models, Statistical</term>
<term>Regression Analysis</term>
<term>Survival Analysis</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Algorithmes</term>
<term>Analyse de régression</term>
<term>Analyse de survie</term>
<term>Humains</term>
<term>Modèles statistiques</term>
<term>Études épidémiologiques</term>
<term>Évaluation des risques</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Survival trees are a popular alternative to parametric survival modeling when there are interactions between the predictor variables or when the aim is to stratify patients into prognostic subgroups. A limitation of classical survival tree methodology is that most algorithms for tree construction are designed for continuous outcome variables. Hence, classical methods might not be appropriate if failure time data are measured on a discrete time scale (as is often the case in longitudinal studies where data are collected, e.g., quarterly or yearly). To address this issue, we develop a method for discrete survival tree construction. The proposed technique is based on the result that the likelihood of a discrete survival model is equivalent to the likelihood of a regression model for binary outcome data. Hence, we modify tree construction methods for binary outcomes such that they result in optimized partitions for the estimation of discrete hazard functions. By applying the proposed method to data from a randomized trial in patients with filarial lymphedema, we demonstrate how discrete survival trees can be used to identify clinically relevant patient groups with similar survival behavior.</div>
</front>
</TEI>
<affiliations><list><country><li>Allemagne</li>
</country>
<region><li>Bavière</li>
<li>District de Cologne</li>
<li>District de Haute-Bavière</li>
<li>Rhénanie-du-Nord-Westphalie</li>
</region>
<settlement><li>Bonn</li>
<li>Munich</li>
</settlement>
<orgName><li>Université Louis-et-Maximilien de Munich</li>
</orgName>
</list>
<tree><country name="Allemagne"><region name="Rhénanie-du-Nord-Westphalie"><name sortKey="Schmid, Matthias" sort="Schmid, Matthias" uniqKey="Schmid M" first="Matthias" last="Schmid">Matthias Schmid</name>
</region>
<name sortKey="Hoerauf, Achim" sort="Hoerauf, Achim" uniqKey="Hoerauf A" first="Achim" last="Hoerauf">Achim Hoerauf</name>
<name sortKey="Kuchenhoff, Helmut" sort="Kuchenhoff, Helmut" uniqKey="Kuchenhoff H" first="Helmut" last="Küchenhoff">Helmut Küchenhoff</name>
<name sortKey="Tutz, Gerhard" sort="Tutz, Gerhard" uniqKey="Tutz G" first="Gerhard" last="Tutz">Gerhard Tutz</name>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/LymphedemaV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001489 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001489 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Sante |area= LymphedemaV1 |flux= Main |étape= Exploration |type= RBID |clé= pubmed:26358826 |texte= A survival tree method for the analysis of discrete event times in clinical and epidemiological studies. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:26358826" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a LymphedemaV1
This area was generated with Dilib version V0.6.31. |